Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015854682.1_cds_XP_016512639.1_25260
CDS Infomation

[gene=LOC107829689] [db_xref=GeneID:107829689] [protein=CDT1-like protein a, chloroplastic isoform X3] [protein_id=XP_016512639.1] [location=join(433..567,1070..1735,1902..2097,2169..2259,4414..4468)] [gbkey=CDS]
Sequence

ATGTGCATGAAGCCAGATGTTAAAATTACCTTGCATTTCGATGCTGTTGAAGATCACAAA
GAACACTCAATGTTTATGACCCTCAGCAATCTTTTTGCATCCAGGCTTGTGGATTTTCTC
CATAAACATGCTCAGCAGGATTGTGACATACCCGAAGCCATACTTCCTGATCCGTTTAAC
CAAAGCTGCCTCACTAGCAATGCAGACCGGTTGCCTATGGACTTACCAAGTCCACTTGAG
TCTGAATTATTATCATCATCTCATCTCTGTCCATCTTTCAGTCCACGCTTTTCTCGGCAG
GCTGTTTCTACAGAAGCAAAGATAGATCATCTCTCAGCACCTTCGCCGGCATGCTTACCT
TGTGTATCTGAATGTACATTGAATGAGGATCTTGATTCTAAAAGGAGATCTCCTAAGTCA
CCCAAATCCTCCATCAACCTGAACAATGTTGAAGAGAGCCAACCTCTACCAGGTTGTAGT
TTGGTTGCAAATGAAAGAACTCCTATGAAGCTCCTGTCTGAAAGTGAAGTAATGCTTGAA
ACACCTGCTCAGCCCACACCAAAGAGATCGGTGCCAATTACCGAAAATAAGTACAAGAGT
ATGACATGCCAAAACTCTGTTGTTTCCAATCTAATTGTCAAAAGGTCATTGGATTTTTCC
ACCTTGGGTGGTGAAGAGATATCTTCAGATTTGAGTTCTGGCAGTATAGAGCATCATGAA
GATGTAGATAATGCCCTTAAAATGGAAAGGAAGTCGATTTCAAAGGAAGATCATGTTAAT
GCTGATATATGCCCTCATGAGGAAAGGAGTTGCTCCTTTAGCAAGGAAGAGAAGAATTAT
CAAAGTCATTTGACTGCGGCCCGGCAGGAATCTCTTGGTTTATCCGATCTTGTTCGTCTA
ATTCACCGCATTTTCCAGTCTGTTGGCTGCCGTTCAATGACTAAAGTGGAGCTTGTTCAC
AAGATCATAGTGCATGACTATGATATTGATGAGAACACTGATGTGGAAGGGCAGATAGAA
CTTCTTGAGAGACTAGTTCCAGATTGGCTATGCAAGAAGTCTGCTCCCACTGGAGACCTT
TTGTACAGTATCAAGAAAGTTCCTGACTTGAGCTCTGTCTGCGAAAGGATTATAGGTGTA
TGA

Peptide Sequence

PEP ID

XP_016512639.1
PEP Infomation

PREDICTED: CDT1-like protein a, chloroplastic isoform X3 [Nicotiana tabacum]
Sequence

MCMKPDVKITLHFDAVEDHKEHSMFMTLSNLFASRLVDFLHKHAQQDCDIPEAILPDPFN
QSCLTSNADRLPMDLPSPLESELLSSSHLCPSFSPRFSRQAVSTEAKIDHLSAPSPACLP
CVSECTLNEDLDSKRRSPKSPKSSINLNNVEESQPLPGCSLVANERTPMKLLSESEVMLE
TPAQPTPKRSVPITENKYKSMTCQNSVVSNLIVKRSLDFSTLGGEEISSDLSSGSIEHHE
DVDNALKMERKSISKEDHVNADICPHEERSCSFSKEEKNYQSHLTAARQESLGLSDLVRL
IHRIFQSVGCRSMTKVELVHKIIVHDYDIDENTDVEGQIELLERLVPDWLCKKSAPTGDL
LYSIKKVPDLSSVCERIIGV

Transcript Sequence

Gene sequence data has not been registered.